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Working Papers List

2007

© NOTICE: The working papers provided here are included by permission of the contributing authors as a means to ensure timely distribution of their scholarly and technical work on a non-commercial basis. Copyright and all rights therein are maintained by the authors. It is understood that all persons copying this information will adhere to the terms and constraints invoked by each author's copyright. These works may not be reposted without the explicit permission of the copyright holder.

Papers are only available electronically. Librarians may request printed copies by sending e-mail to wp@santafe.edu.

Title:Nested Subgraphs of Complex Networks
Author(s):Bernat Corominas-Murtra, José F. F. Mendes, and Ricard V. Solé
Files:[abstract]  [pdf]
Paper #:07-12-050
 
Title:Power-Law Distributions in Empirical Data
Author(s):Aaron Clauset, Cosma Rohilla Shalizi, and M. E. J. Newman
Files:[abstract]  [pdf]
Paper #:07-12-049
 
Title:Coupled Contagion Dynamics of Fear and Disease: Mathematical and Computational Explorations
Author(s):Joshua M. Epstein, Jon Parker, Derek Cummings, and Ross A. Hammond
Files:[abstract]  [pdf]
Paper #:07-12-048
 
Title:The Non-trivial Random Walk of Stock Prices
Author(s):Gabriele La Spada, J. Doyne Farmer, and Fabrizio Lillo
Files:[abstract]  [pdf]
Paper #:07-12-047
 
Title:Dynamics of Technological Development in the Energy Sector
Author(s):J. Doyne Farmer and Jessika Trancik
Files:[abstract]  [pdf]
Paper #:07-12-046
 
Title:Role Models for Complex Networks
Author(s):Jörg Reichardt and Douglas R. White
Files:[abstract]  [pdf]
Paper #:07-12-045
 
Title:The Economic Fundamentals of Global Warming
Author(s):Duncan K. Foley
Files:[abstract]  [pdf]
Paper #:07-12-044
 
Title:Damage Spreading and Criticality in Finite Random Dynamical Networks
Author(s):Thimo Rohlf, Natali Gulbahce, and Christof Teuscher
Files:[abstract]  [pdf]
Paper #:07-12-043
 
Title:Quantum Algorithms and Complexity for Continuous Problems
Author(s):A. Papageorgiou and J. F. Traub
Files:[abstract]  [pdf]
Paper #:07-12-042
 
Title:Learning Nash Equilibrium
Author(s):Ramon Marimon, Ellen McGrattan, and Thomas J. Sargent
Files:[abstract]  [No electronic files available.]
Paper #:07-11-041
 
Title:Simple Quasispecies Models for the Survival-of-the-Flattest Effect: The Role of Space
Author(s):Josep Sardanyés, Santiago F. Elena, and Ricard V. Solé
Files:[abstract]  [pdf]
Paper #:07-11-041
 
Title:Robustness of the European Power Grids under Intentional Attack
Author(s):Ricard V. Solé, Martí Rosas-Casals, Bernat Corominas-Murtra, and Sergi Valverde
Files:[abstract]  [pdf]
Paper #:07-11-040
 
Title:Correlations and Clustering in the Trading of Members of the London Stock Exchange
Author(s):Ilija I. Zovko and J. Doyne Farmer
Files:[abstract]  [pdf]
Paper #:07-10-039
 
Title:Innovation Diffusion in Heterogeneous Populations: Contagion, Social Influence, and Social Learning
Author(s):H. Peyton Young
Files:[abstract]  [pdf]
Paper #:07-09-038
 
Title:Multifunctionality and Robustness Tradeoffs in Model Genetic Circuits
Author(s):Andreas Wagner
Files:[abstract]  [pdf]
Paper #:07-09-037
 
Title:Gene Networks and Natural Selection: Is There a Network Biology?
Author(s):Andreas Wagner
Files:[abstract]  [pdf]
Paper #:07-09-036
 
Title:From Bit to It: How a Complex Metabolic Network Transforms Information into Living Matter
Author(s):Andreas Wagner
Files:[abstract]  [pdf]
Paper #:07-09-035
 
Title:Rapid Detection of Positive Selection in Genes and Genomes through Variation Clusters
Author(s):Andreas Wagner
Files:[abstract]  [pdf]
Paper #:07-09-034
 
Title:Funnels in Energy Landscapes
Author(s):Konstantin Klemm, Christoph Flamm, and Peter F. Stadler
Files:[abstract]  [pdf]
Paper #:07-09-033
 
Title:A Simple Evolutionary Game with Feedback between Perception and Reality
Author(s):Dmitriy Cherkashin, J. Doyne Farmer, and Seth Lloyd
Files:[abstract]  [pdf]
Paper #:07-08-032
 
Title:A Note on Fundamental, Non-fundamental, and Robust Cycle Bases
Author(s):Konstantin Klemm and Peter F. Stadler
Files:[abstract]  [pdf]
Paper #:07-08-031
 
Title:Random Matrix Ensembles of Time-Lagged Correlation Matrices: Derivation of Eigenvalue Spectra and Analysis of Financial Time-Series
Author(s):Christoly Biely and Stefan Thurner
Files:[abstract]  [pdf]
Paper #:07-08-030
 
Title:Physics of Information
Author(s):F. Alexander Bais and J. Doyne Farmer
Files:[abstract]  [pdf]
Paper #:07-08-029
 
Title:Cooperation
Author(s):Samuel Bowles and Herbert Gintis
Files:[abstract]  [pdf]
Paper #:07-08-028
 
Title:Towards a Physics of Evolution: Critical Diversity Dynamics at the Edges of Collapse and Bursts of Diversification
Author(s):Rudolf Hanel, Stuart A. Kauffman, and Stefan Thurner
Files:[abstract]  [pdf]
Paper #:07-08-027
 
Title:Unified Model for Network Dynamics Exhibiting Nonextensive Statistics
Author(s):Stefan Thurner, Fragiskos Kyriakopoulos, and Constantino Tsallis
Files:[abstract]  [pdf]
Paper #:07-08-026
 
Title:Discovering Cis-Regulatory Modules by Optimizing Barbecues
Author(s):Axel Mosig, Türker Biyikoglu, Sonja J. Prohaska, and Peter F. Stadler
Files:[abstract]  [pdf]
Paper #:07-08-025
 
Title:Optimal Causal Inference
Author(s):Susanne Still, James P. Crutchfield, and Christopher J. Ellison
Files:[abstract]  [pdf]
Paper #:07-08-024
 
Title:Robustness of the Second Law of Thermodynamics under Generalizations of the Maximum Entropy Method
Author(s):Sumiyoshi Abe and Stefan Thurner
Files:[abstract]  [pdf]
Paper #:07-08-023
 
Title:Solvable Spin Model on Dynamical Networks
Author(s):Christoly Biely, Rudolf Hanel, and Stefan Thurner
Files:[abstract]  [pdf]
Paper #:07-08-022
 
Title:Computational Feature-Sensitive Reconstruction of Language Relationships: Developing the ALINE Distance for Comparative Historical Linguistic Reconstruction
Author(s):Sean S. Downey, Brian Hallmark, Murray P. Cox, Peter Norquest, and J. Stephen Lansing
Files:[abstract]  [pdf]
Paper #:07-08-021
 
Title:Structure or Noise?
Author(s):Susanne Still and James P. Crutchfield
Files:[abstract]  [pdf]
Paper #:07-08-020
 
Title:Institutions Influence Preferences
Author(s):Carlos Rodríguez-Sickert, Ricardo-Andrés Guzmán, and Juan-Camilo Cárdenas
Files:[abstract]  [pdf]
Paper #:07-08-019
 
Title:Gene and Genon Concept: Coding versus Regulation -- A Conceptual and Information-Theoretic Analysis of Genetic Storage and Expression in the Light of Modern Molecular Biology
Author(s):Klaus Scherrer and Juergen Jost
Files:[abstract]  [pdf]
Paper #:07-08-018
 
Title:The Critical Line in Random Threshold Networks with Inhomogeneous Thresholds
Author(s):Thimo Rohlf
Files:[abstract]  [pdf]
Paper #:07-08-017
 
Title:Factorizable Language: From Dynamics to Biology
Author(s):Bailin Hao and Huimin Xie
Files:[abstract]  [pdf]
Paper #:07-08-016
 
Title:Animal Cell Differentiation Patterns Suppress Somatic Evolution
Author(s):John W. Pepper, Kathleen Sprouffske, and Carlo C. Maley
Files:[abstract]  [pdf]
Paper #:07-07-015
 
Title:A General Mathematical Theory of Discounting
Author(s):Robert Axtell and Gregory McRae
Files:[abstract]  [pdf]
Paper #:07-06-014
 
Title:Spontaneous Emergence of Modularity in Cellular Networks
Author(s):Ricard V. Solé and Sergi Valverde
Files:[abstract]  [pdf]
Paper #:07-06-013
 
Title:The Ontogeny of Scale-Free Syntax Networks through Language Acquisition
Author(s):Bernat Corominas-Murtra, Sergi Valverde, and Ricard V. Solé
Files:[abstract]  [pdf]
Paper #:07-06-012
 
Title:Scaling Metabolic Rate Fluctuations
Author(s):Fabio A. Labra, Pablo A. Marquet, and F. Bozinovic
Files:[abstract]  [pdf]
Paper #:07-06-011
 
Title:Prokaryote Phylogeny Meets Taxonomy: An Exhaustive Comparison of Composition Vector Trees with Systematic Bacteriology
Author(s):Lei Gao, Ji Qi, Jiandong Sun, and Bailin Hao
Files:[abstract]  [pdf]
Paper #:07-06-010
 
Title:Cancer Stem Cells as the Engine of Tumor Progression
Author(s):Ricard V. Solé, Carlos Rodriguez-Caso, Thomas S. Deisboeck, and Joan Saldanya
Files:[abstract]  [pdf]
Paper #:07-06-009
 
Title:Primordial Evolution in the Finitary Process Soup
Author(s):Olof Gornerup and James P. Crutchfield
Files:[abstract]  [pdf]
Paper #:07-05-008
 
Title:Computation in Sofic Quantum Dynamical Systems
Author(s):Karoline Wiesner and James P. Crutchfield
Files:[abstract]  [pdf]
Paper #:07-05-007
 
Title:Trading Networks with Price-Setting Agents
Author(s):Larry Blume, David Easley, Jon Kleinberg, and Eva Tardos
Files:[abstract]  [pdf]
Paper #:07-04-006
 
Title:Inferring Markov Chains: Bayesian Estimation, Model Comparison, Entropy Rate, and Out-of-Class Modeling
Author(s):Christopher C. Strelioff, James P. Crutchfield, and Alfred Hubler
Files:[abstract]  [pdf]
Paper #:07-04-005
 
Title:Power
Author(s):Samuel Bowles and Herbert Gintis
Files:[abstract]  [pdf]
Paper #:07-01-004
 
Title:Social Preferences and Public Economics: Are Good Laws a Substitute for Good Citizens?
Author(s):Samuel Bowles
Files:[abstract]  [pdf]
Paper #:07-01-003
 
Title:Procedural Rationality and Equilibrium Trust
Author(s):Robert Rowthorn and Rajiv Sethi
Files:[abstract]  [pdf]
Paper #:07-01-002
 
Title:Language as Shaped by the Brain
Author(s):Morten H. Christiansen and Nick Chater
Files:[abstract]  [pdf]
Paper #:07-01-001