Santa Fe
Institute

Atypical neural topographies underpin dysfunctional pattern separation in temporal lobe epilepsy

Li, Qiongling; Shahin Tavakol; Jessica Royer; Sare Lariviere; Reinder Vox De Wael; Bo-yong Park; Casey Paquola; Debin Zeng; Benoitu Caldairou; Danielle Bassett; Andrea Bernasconi; Neda Bernasconi; Birgit Grauscher; Jonathan Smallwood; Lorenzo Caciagli; Shuyu Li and Boris C. Bernhardt
2021
Brain
144
2486-2498
Abstract

Emerging adaptive strategies under temperature fluctuations in a laboratory evolution experiment of Escherichia coli

Lambros, Maryl; Ximo Pechuan-Jorge; Daniel Biro; Kenny Ye and Aviv Bergman
2021
Frontiers in Microbiology
12
Abstract

Work, entropy production, and thermodynamics of information under protocol constraints

Kolchinsky, Artemy and David H. Wolpert
2021
Physical Review X
11
4
Abstract

Remotely sensed assessment of increasing chronic and episodic drought effects on a Costa Rican tropical dry forest

Huang, Cho-Ying; Sandra M. Duran; Kai-Ting Hu; Hsin-Ju Li; Nathan G. Swenson and Brian J. Enquist
2021
Ecosphere
12
11
Abstract

Synchronization within synchronization: Transients and intermittency in ecological networks

Fan, Huawei; Ling-Wei Kong; Xingang Wang; Alan Hastings and Ying-Cheng Lai
2021
National Science Review
8
10
Abstract

Biodiversity loss due to more than climate change

Dobson, Andrew; Zeke Rowe; Joel Berger; Philippa Wholey and Tim Caro
2021
Science
374
6568
698-699
Abstract

Introduction to the special issue: quantifying collectivity

Daniels, Bryan C.; Manfred D. Laubichler and Jessica C. Flack
2021
Theory in Biosciences
140
321-232
Abstract

Natural selection beyond life? A workshop report

Charlat, Sylvain; Andre Ariew; Pierrick Bourrat; Maria Ferreira Ruiz; Thomas Heams; Philippe Huneman; Sandeep Krishna; Michael Lachmann; Nicolas Lartilot; Louis Le Sergeant d’heidecourt; Christophe Maladerre; Philippe Nghe; Etienne Rajon; Olivier Rivoire; Matteo Smerlak and Zorana Zeravcic
2021
Life - Basel
11
10
Abstract

Conservation needs to integrate knowledge across scales

Chaplin-Kramer, Rebecca; Kate A. Brauman; Jeannine Cavender-Bares; Sandra Diaz; Gabriela Teixeira Duarte; Brian J. Enquist; Lucas A. Garibaldi; Jonas Geldmann; Benjamin S. Halpern; Thomas W. Hertel; Colin K. Khoury; Joana Madeira Krieger; Sandra Lavorel; Thomas Mueller; Rachel A. Neugarten; Jesus Pinto-Ledezma; Stephen Polasky; Andy Purvis; Victoria Reyes-Garcia; Patrick R. Roehrdanz; Lynne J. Shannon; M. Rebecca Shaw; Bernardo B. N. Strassburg; Jason M. Tylianakis; Peter H. Vergurg; Piero Visconti and Noelia Zafra-Calvo
2021
Nature Ecology & Evolution
6
118-118
Abstract

Monotonicity in the averaging process

Ben-Naim, E. and P. L. Krapovsky
2021
Journal of Physics A - Mathematical and Theoretical
54
49
Abstract

Disturbance of phylogenetic layer-specific adaptation of human brain gene expression in Alzheimer’s disease

Jorge, Natasha Andressa Nogueira; Uwe Ueberham; Mara Knobloch; Peter F. Stadler; Jorg Fallman and Thomas Arendt
2021
Scientific Reports
11
Abstract

Systematic shifts in scaling behavior based on organizational strategy in universities

Taylor, Ryan C.; Xiaofan Liang; Manfred D. Laubichler; Geoffrey B. West; Christopher P. Kempes and Marion Dumas
2021
PLOS ONE
Abstract

TwinCons: Conservation score for uncovering deep sequence similarity and divergence

Penev, Petar I.; Claudia Alvarez-Carreno; Eric Smith; Anton S. Petrov and Loren Dean Williams
2021
PLOS Computational Biology
Abstract

Dependence of integrated, instantaneous, and fluctuating entropy production on the initial state in quantum and classical processes

Kolchinsky, Artemy and David H. Wolpert
2021
Physical Review E
104
5
Abstract

Antibiotics shift the temperature response curve of Escherichia coli growth

Cruz-Loya, Mauricio; Elif Tekin; Tina Manzhu Kang; Natalya Cardona; Natalie Lozano-Huntelman; Alejandra Rodriguez-Verdugo; Van M. Savage and Pamela J. Yeh
2021
Msystems
6
4
Abstract

Altered functional brain dynamics in chromosome 22q11.2 deletion syndrome during facial affect processing

Cornblath, Eli J.; Arun Mahadevan; Xiaosong He; Kosha Ruparel; David M. Lydon-Staley; Tyler M. Moore; Ruben C. Gur; Elaine H. Zackai; Beverly Emanuel; Donna M. McDonald-McGinn; Daniel H. Wolf; Theodore D. Satterhwaite; David R. Roald; Raquel E. Gur and Dani S. Bassett,Source: Molecular Psychiatry; DOI: 10.1038/s41380-021-01302-y; October 2021
2021
Molecular Psychiatry
Abstract

A meta-analysis study of the robustness and universality of gut microbiome-metabolome associations

Miller, Efrat; Yadid M. Algavi and Elhanan Borenstein
2021
Microbiome
9
Abstract

The interplay between the host microbiome and pathogenic viral infections

Gonzalez, Ruben; Santiago F. Elena
2021
mBio
12
6
Abstract

Lexicostatistical studies in Khoisan II/1: How to make a Swadesh wordlist for Proto-Tuu

Starostin, George
2021
Journal of Language Relationship
19
2
99-135
Abstract

End-to-end Bayesian analysis for summarizing sets of radiocarbon dates

Price, Michael Holton; Jose M. Capriles; Julie A. Hoggarth; R. Kyle Bocinsky; Claire E. Ebert and James Holland Jones
2021
Journal of Archaeological Science
135
Abstract