Santa Fe
Institute

A computational exploration of resilience and evolvability of protein-protein interaction networks

Klein, Brennan; Ludvig Holmer; Keith M. Smith; Mackenzie M. Johnson; Anshuman Swain; Laura Stolp; Ashley I. Teufel and April S. Kleppe
2021
Communications Biology
4
1
Abstract

Translation stalling proline motifs are enriched in slow-growing, thermophilic, and multicellular bacteria

Brewer, Tess E. and Andreas Wagner
2021
ISME Journal
Abstract

Challenges in modeling the dynamics of infectious diseases at the wildlife-human interface

Roberts, Mick; Andrew Dobson; Olivier Restif and Konstans Wells
2021
Epidemics
Abstract

Transients in ecology: Stochasticity, management, and understanding

Abbott, Karen C.; Kim Cuddington and Alan Hastings
2021
Theoretical Ecology
14
623-625
Abstract

Tempos and modes of collectivity in the history of life

Erwin, Douglas H.
2021
Theory in Biosciences
140
4
343-351
Abstract

Determinants of lithium-ion battery technology cost decline

Ziegler, Micah S.; Juhyun Song and Jessika E. Trancik
2021
Energy & Environment Science
14
6074-6098
Abstract

An atlas of fragrance chemicals in children’s products

Ravichandran, Janani; Bagavathy Shanmugam Karthikeyan; Jurgen Jost and Areejit Samal
2021
Science of the Total Environment;
Abstract

Innovations are disproportionately likely in the periphery of a scientific network

Painter, Deryc T.; Bryan C. Daniels and Manfred D. Laubichler
2021
Theory in Biosciences;
140
4
391-399
Abstract

Comprehensive benchmarking of software for mapping whole genome bisulfite data: from read alignment to DNA methylation analysis

Nunn, Adam; Chrstian Otto; Peter F. Stadler and David Langenberger
2021
Briefings in Bioinformatics
22
5
Abstract

Atypical neural topographies underpin dysfunctional pattern separation in temporal lobe epilepsy

Li, Qiongling; Shahin Tavakol; Jessica Royer; Sare Lariviere; Reinder Vox De Wael; Bo-yong Park; Casey Paquola; Debin Zeng; Benoitu Caldairou; Danielle Bassett; Andrea Bernasconi; Neda Bernasconi; Birgit Grauscher; Jonathan Smallwood; Lorenzo Caciagli; Shuyu Li and Boris C. Bernhardt
2021
Brain
144
2486-2498
Abstract

Emerging adaptive strategies under temperature fluctuations in a laboratory evolution experiment of Escherichia coli

Lambros, Maryl; Ximo Pechuan-Jorge; Daniel Biro; Kenny Ye and Aviv Bergman
2021
Frontiers in Microbiology
12
Abstract

Work, entropy production, and thermodynamics of information under protocol constraints

Kolchinsky, Artemy and David H. Wolpert
2021
Physical Review X
11
4
Abstract

Remotely sensed assessment of increasing chronic and episodic drought effects on a Costa Rican tropical dry forest

Huang, Cho-Ying; Sandra M. Duran; Kai-Ting Hu; Hsin-Ju Li; Nathan G. Swenson and Brian J. Enquist
2021
Ecosphere
12
11
Abstract

Synchronization within synchronization: Transients and intermittency in ecological networks

Fan, Huawei; Ling-Wei Kong; Xingang Wang; Alan Hastings and Ying-Cheng Lai
2021
National Science Review
8
10
Abstract

Biodiversity loss due to more than climate change

Dobson, Andrew; Zeke Rowe; Joel Berger; Philippa Wholey and Tim Caro
2021
Science
374
6568
698-699
Abstract

Introduction to the special issue: quantifying collectivity

Daniels, Bryan C.; Manfred D. Laubichler and Jessica C. Flack
2021
Theory in Biosciences
140
321-232
Abstract

Natural selection beyond life? A workshop report

Charlat, Sylvain; Andre Ariew; Pierrick Bourrat; Maria Ferreira Ruiz; Thomas Heams; Philippe Huneman; Sandeep Krishna; Michael Lachmann; Nicolas Lartilot; Louis Le Sergeant d’heidecourt; Christophe Maladerre; Philippe Nghe; Etienne Rajon; Olivier Rivoire; Matteo Smerlak and Zorana Zeravcic
2021
Life - Basel
11
10
Abstract

Conservation needs to integrate knowledge across scales

Chaplin-Kramer, Rebecca; Kate A. Brauman; Jeannine Cavender-Bares; Sandra Diaz; Gabriela Teixeira Duarte; Brian J. Enquist; Lucas A. Garibaldi; Jonas Geldmann; Benjamin S. Halpern; Thomas W. Hertel; Colin K. Khoury; Joana Madeira Krieger; Sandra Lavorel; Thomas Mueller; Rachel A. Neugarten; Jesus Pinto-Ledezma; Stephen Polasky; Andy Purvis; Victoria Reyes-Garcia; Patrick R. Roehrdanz; Lynne J. Shannon; M. Rebecca Shaw; Bernardo B. N. Strassburg; Jason M. Tylianakis; Peter H. Vergurg; Piero Visconti and Noelia Zafra-Calvo
2021
Nature Ecology & Evolution
6
118-118
Abstract

Monotonicity in the averaging process

Ben-Naim, E. and P. L. Krapovsky
2021
Journal of Physics A - Mathematical and Theoretical
54
49
Abstract

Disturbance of phylogenetic layer-specific adaptation of human brain gene expression in Alzheimer’s disease

Jorge, Natasha Andressa Nogueira; Uwe Ueberham; Mara Knobloch; Peter F. Stadler; Jorg Fallman and Thomas Arendt
2021
Scientific Reports
11
Abstract